BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E10LP1|AL428744
(734 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1409 0.0
>3x_Contig1619
Length = 7770
Score = 1409 bits (703), Expect = 0.0
Identities = 720/734 (98%)
Strand = Plus / Plus
Query: 1 gcaaataatacattgtattatttgcggataatcttatatattattatccactttcgtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5311 gcaaataatacattgtattatttgcggataatcttatatattattatccactttcgtaac 5370
Query: 61 gtaatttttataaagaattgcaagaaatatattatattcttattataatattatattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5371 gtaatttttataaagaattgcaagaaatatattatattcttattataatattatattttt 5430
Query: 121 vatacttataatgggacttgaacctatatacttcgcttatgagacgaatgttttaaccaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5431 aatacttataatgggacttgaacctatatacttcgcttatgagacgaatgttttaaccaa 5490
Query: 181 ttaaactatacaagttattatatatttatataatagtataamattacctaatatttatta 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5491 ttaaactatacaagttattatatatttatataatagtataaaattacctaatatttatta 5550
Query: 241 agtmatttcccgcggtcacctcccttcggggggtgccgcgggtagatattaatttatata 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5551 agtaatttcccgcggtcacctcccttcggggggtgccgcgggtagatattaatttatata 5610
Query: 301 agccccaaatgcatcatccctatgaggatgtcgcatttggggcaaagggtgaatactgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5611 agccccaaatgcatcatccctatgaggatgtcgcatttggggcaaagggtgaatactgag 5670
Query: 361 aattgaactcagatttaacgcgccacaagcattctttctacctttgamatatattcacct 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5671 aattgaactcagatttaacgcgccacaagcattctttctacctttgaaatatattcacct 5730
Query: 421 ataattatatatmavmmtmtagamaaatgaacggrcaatatgagagtcgaactcataaga 480
|||||||||||| | | |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 5731 ataattatatataaaaatatagaaaaatgaacggaaaatatgagagtcgaactcataaga 5790
Query: 481 acatagttcaattatgtagcaaataatctaccttaccaatagtgaattttcctattacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5791 acatagttcaattatgtagcaaataatctaccttaccaatagtgaattttcctattacga 5850
Query: 541 atctaatcagacttgcactgacatcaaccatcgtgacaagatgggactttactattaagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5851 atctaatcagacttgcactgacatcaaccatcgtgacaagatgggactttactattaagc 5910
Query: 601 tacagatccattatataattttvctgtgtatccttaaaaaaaaattaagtacaggattat 660
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5911 tacagatccattatataattttactgtgtatccttaaaaaaaaattaagtacaggattat 5970
Query: 661 caaaattaatataacccgccaatttatataataaattggcgggttatatatctatatata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5971 caaaattaatataacccgccaatttatataataaattggcgggttatatatctatatata 6030
Query: 721 tttttntatataat 734
||||| ||||||||
Sbjct: 6031 tttttatatataat 6044
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6712
Number of Sequences: 1807
Number of extensions: 6712
Number of successful extensions: 246
Number of sequences better than 1.0e-20: 1
length of query: 734
length of database: 10,358,551
effective HSP length: 16
effective length of query: 718
effective length of database: 10,329,639
effective search space: 7416680802
effective search space used: 7416680802
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)